Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AL139158.3-201ENST00000641212 1562 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 AC004554.1-201ENST00000422830 1468 ntBASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC16.29■□□□□ 0.2
CTDP1Q9Y5B0 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 HSPA8P5-201ENST00000456928 2069 ntBASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AL355334.1-201ENST00000417713 215 ntBASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 RN7SL375P-201ENST00000492442 298 ntBASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 SNORD3B-1-201ENST00000577988 758 ntBASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 MIR4265-201ENST00000582152 99 ntBASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTDP1Q9Y5B0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 RN7SL23P-201ENST00000484055 275 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AL157792.1-201ENST00000488281 530 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 RN7SKP155-201ENST00000516031 288 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AC226150.1-201ENST00000544259 466 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AC132825.4-202ENST00000578792 434 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 MIR4472-1-201ENST00000584349 80 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 AC138466.5-201ENST00000624002 808 ntBASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTDP1Q9Y5B0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms