Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TTTY23B-201ENST00000442790 549 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CNN2P10-201ENST00000443067 918 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 KLF2P1-201ENST00000447438 1042 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 BTNL10-201ENST00000595971 695 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 MKRN5P-201ENST00000445263 1467 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 RCC2P1-201ENST00000452257 1476 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC061965.1-201ENST00000560524 1465 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AC007952.5-201ENST00000572818 1486 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SALL4P6-201ENST00000429385 1691 ntBASIC12.64□□□□□ -0.39
COPS3Q9UNS2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AP006547.1-201ENST00000563435 692 ntBASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AC124068.2-201ENST00000569473 1109 ntBASIC12.63□□□□□ -0.39
COPS3Q9UNS2 AC132938.2-201ENST00000579188 680 ntBASIC12.63□□□□□ -0.39
COPS3Q9UNS2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms