Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GULOP-201ENST00000454030 748 ntBASIC15.72■□□□□ 0.11
COL20A1Q9P218 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 AC008026.2-201ENST00000495438 348 ntBASIC15.72■□□□□ 0.11
COL20A1Q9P218 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 AC126755.5-201ENST00000622756 267 ntBASIC15.72■□□□□ 0.11
COL20A1Q9P218 CR392039.2-201ENST00000623182 509 ntBASIC15.72■□□□□ 0.11
COL20A1Q9P218 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL20A1Q9P218 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL20A1Q9P218 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 ABCD1P4-201ENST00000399687 604 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 FAM21EP-201ENST00000417804 985 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC024293.1-201ENST00000467930 498 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 GOLGA2P7-209ENST00000560408 745 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC141586.1-203ENST00000567242 366 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC026336.4-201ENST00000624565 1050 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 AC020763.3-201ENST00000625095 2904 ntBASIC15.71■□□□□ 0.11
COL20A1Q9P218 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.71■□□□□ 0.11
COL20A1Q9P218 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL20A1Q9P218 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
COL20A1Q9P218 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL20A1Q9P218 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.71■□□□□ 0.1
COL20A1Q9P218 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.71■□□□□ 0.1
COL20A1Q9P218 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 AC090136.2-201ENST00000517809 420 ntBASIC15.7■□□□□ 0.1
COL20A1Q9P218 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 MIR3940-201ENST00000579148 102 ntBASIC15.7■□□□□ 0.1
COL20A1Q9P218 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.7■□□□□ 0.1
COL20A1Q9P218 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL20A1Q9P218 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms