Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC103592.1-201ENST00000394513 664 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 HMGA1P1-201ENST00000415560 1062 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 OR8T1P-201ENST00000421347 918 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 DUX4L50-201ENST00000455245 715 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC024681.1-201ENST00000521917 487 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AL161670.2-201ENST00000557650 1227 ntBASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CUEDC1Q9NWM3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.71□□□□□ -0.22
CUEDC1Q9NWM3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AC012618.1-201ENST00000461223 412 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 HMGB3P14-201ENST00000494195 599 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AC006518.1-201ENST00000541449 943 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AC137695.1-201ENST00000604126 489 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 COX6A1P2-201ENST00000620597 330 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms