Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PRSS3P1-201ENST00000503996 742 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 COQ10BP2-201ENST00000513804 724 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 MIR4472-1-201ENST00000584349 80 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC245140.2-201ENST00000624054 1939 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC108024.1-201ENST00000626286 1721 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 FLJ16779-201ENST00000612722 7638 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 OR2W2P-201ENST00000406313 909 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 RN7SL767P-201ENST00000493013 295 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC226150.1-201ENST00000544259 466 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 AC141586.1-203ENST00000567242 366 ntBASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
KIAA1549Q9HCM3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 CTBP2P8-201ENST00000422584 1330 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 AC020763.3-201ENST00000625095 2904 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 LINC00638-201ENST00000555578 2518 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 AC005014.1-201ENST00000432006 2976 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 GGTLC4P-201ENST00000402176 664 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 EEF1GP8-201ENST00000506566 1154 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 AC012073.1-201ENST00000606114 1108 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 FUCA1P1-201ENST00000374476 1351 ntBASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
KIAA1549Q9HCM3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms