Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM55Q9BYV6 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AL138709.1-201ENST00000614840 1693 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AL022313.4-201ENST00000562756 2046 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 LINC02486-201ENST00000604157 3000 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 Z93015.1-201ENST00000451718 390 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 KRT18P25-201ENST00000508931 1278 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AP005019.2-201ENST00000615104 511 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 AL928654.5-201ENST00000624831 2501 ntBASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM55Q9BYV6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AC125807.2-201ENST00000513358 3514 ntBASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 USP17L6P-201ENST00000382470 1197 ntBASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AL022328.3-201ENST00000607943 679 ntBASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM55Q9BYV6 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms