Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PCDHA3-202ENST00000532566 4594 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00638-201ENST00000555578 2518 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ATG10-IT1-201ENST00000396880 487 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC097065.1-201ENST00000425737 517 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AL512306.1-201ENST00000432698 848 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LYPLA2P1-203ENST00000447689 696 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RN7SL375P-201ENST00000492442 298 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC093826.1-201ENST00000508655 993 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AP003398.1-201ENST00000531124 318 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 OR5BD1P-201ENST00000532527 817 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC007250.1-201ENST00000608934 338 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC091769.1-201ENST00000619576 568 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC103798.2-201ENST00000624292 632 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC002044.2-201ENST00000624910 970 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 AC012183.1-201ENST00000625197 499 ntBASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-3Q9BYR4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms