Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.12■□□□□ 0.01
BEST2Q8NFU1 RN7SL736P-201ENST00000613111 269 ntBASIC15.12■□□□□ 0.01
BEST2Q8NFU1 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BEST2Q8NFU1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 RN7SKP109-201ENST00000410592 316 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 RPL18AP3-201ENST00000462885 528 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 COQ10BP2-201ENST00000513804 724 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 RNA5SP417-201ENST00000516459 108 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 TMCO5B-205ENST00000530020 894 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 MIR3180-2-201ENST00000581748 88 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 MIR6727-201ENST00000620702 65 ntBASIC15.11■□□□□ 0.01
BEST2Q8NFU1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
BEST2Q8NFU1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 GRK6P1-201ENST00000400595 1711 ntBASIC15.1■□□□□ 0.01
BEST2Q8NFU1 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 HIST2H2BA-201ENST00000412169 381 ntBASIC15.1■□□□□ 0.01
BEST2Q8NFU1 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.1■□□□□ 0.01
BEST2Q8NFU1 AL354861.1-201ENST00000445213 355 ntBASIC15.1■□□□□ 0.01
BEST2Q8NFU1 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms