Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 TSPY26P-202ENST00000565928 3884 ntBASIC14.9□□□□□ -0.02
NPAS4Q8IUM7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AC061965.1-201ENST00000560524 1465 ntBASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AC103563.1-201ENST00000429316 123 ntBASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 RPSAP12-201ENST00000435879 888 ntBASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NPAS4Q8IUM7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 AC093462.1-201ENST00000621167 1683 ntBASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 HLA-DMA-202ENST00000395303 1007 ntBASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 IFNWP2-201ENST00000431203 580 ntBASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPAS4Q8IUM7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS4Q8IUM7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms