Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC015967.2-201ENST00000624092 234 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC006435.4-201ENST00000625037 234 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AL356737.1-201ENST00000634391 234 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC068587.10-201ENST00000641210 219 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF44Q7L0R7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AC019193.1-201ENST00000506678 823 ntBASIC13.53□□□□□ -0.24
RNF44Q7L0R7 RNA5SP423-201ENST00000517127 109 ntBASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 RN7SL455P-201ENST00000580629 282 ntBASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AL021707.6-201ENST00000609212 491 ntBASIC13.53□□□□□ -0.24
RNF44Q7L0R7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms