Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 AL358781.1-202ENST00000321081 1360 ntBASIC13.18□□□□□ -0.3
REEP3Q6NUK4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
REEP3Q6NUK4 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 AL356585.2-201ENST00000625078 2396 ntBASIC13.17□□□□□ -0.3
REEP3Q6NUK4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DUX4L45-201ENST00000566406 1057 ntBASIC13.17□□□□□ -0.3
REEP3Q6NUK4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 AC005324.6-201ENST00000587972 613 ntBASIC13.17□□□□□ -0.3
REEP3Q6NUK4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 AL512343.1-201ENST00000605837 169 ntBASIC13.17□□□□□ -0.3
REEP3Q6NUK4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 FMO6P-201ENST00000236166 1620 ntBASIC13.17□□□□□ -0.3
REEP3Q6NUK4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
REEP3Q6NUK4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AC008620.2-201ENST00000510294 1569 ntBASIC13.16□□□□□ -0.3
REEP3Q6NUK4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 HLA-V-201ENST00000429037 534 ntBASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AC021723.1-201ENST00000486306 515 ntBASIC13.16□□□□□ -0.3
REEP3Q6NUK4 AC104989.1-201ENST00000519711 778 ntBASIC13.16□□□□□ -0.3
REEP3Q6NUK4 KRT17P8-201ENST00000540749 863 ntBASIC13.16□□□□□ -0.3
REEP3Q6NUK4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.16□□□□□ -0.3
REEP3Q6NUK4 MIR3197-201ENST00000582241 73 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms