Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR8071-2-201ENST00000616772 65 ntBASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 NRADDP-202ENST00000641269 1585 ntBASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.24■□□□□ 0.19
SHROOM1Q2M3G4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 AGAP10P-201ENST00000454844 2418 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 GEMIN8P4-201ENST00000380526 729 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 RN7SL351P-201ENST00000469306 248 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 COQ10BP2-201ENST00000513804 724 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 EIF5AP2-201ENST00000585668 1047 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHROOM1Q2M3G4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AC006548.2-201ENST00000605217 529 ntBASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AC005274.1-201ENST00000623460 802 ntBASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 AL136379.1-201ENST00000623471 2642 ntBASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms