Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
AP3S2P59780 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 CSPG4P13-202ENST00000567704 4801 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 ACTBP8-201ENST00000403258 1108 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 SSR4P1-201ENST00000415143 412 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 AC023141.5-201ENST00000458585 616 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.14□□□□□ -0.47
AP3S2P59780 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 RARRES2P5-201ENST00000564013 466 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S2P59780 AC004466.1-201ENST00000599515 1080 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.14□□□□□ -0.47
AP3S2P59780 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
AP3S2P59780 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S2P59780 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S2P59780 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP3S2P59780 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S2P59780 HMGA1P1-201ENST00000415560 1062 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S2P59780 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S2P59780 AL035414.1-201ENST00000451327 857 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 MESTP3-201ENST00000503460 968 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 AC068587.3-201ENST00000526613 355 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 AC120045.2-201ENST00000567334 178 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S2P59780 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S2P59780 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 AP005019.2-201ENST00000615104 511 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP3S2P59780 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP3S2P59780 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S2P59780 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S2P59780 BTBD7P1-201ENST00000447253 1453 ntBASIC12.13□□□□□ -0.47
AP3S2P59780 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S2P59780 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms