Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.2□□□□□ -0.3
PER3P56645 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PER3P56645 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PER3P56645 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.2□□□□□ -0.3
PER3P56645 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PER3P56645 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PER3P56645 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.19□□□□□ -0.3
PER3P56645 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 RPL8P2-201ENST00000430538 502 ntBASIC13.19□□□□□ -0.3
PER3P56645 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.19□□□□□ -0.3
PER3P56645 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.19□□□□□ -0.3
PER3P56645 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.19□□□□□ -0.3
PER3P56645 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.19□□□□□ -0.3
PER3P56645 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
PER3P56645 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.19□□□□□ -0.3
PER3P56645 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.19□□□□□ -0.3
PER3P56645 AP001267.2-201ENST00000532619 2086 ntBASIC13.19□□□□□ -0.3
PER3P56645 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PER3P56645 AL118506.1-201ENST00000601296 3082 ntBASIC13.19□□□□□ -0.3
PER3P56645 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PER3P56645 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 MIR1227-201ENST00000408484 88 ntBASIC13.18□□□□□ -0.3
PER3P56645 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 VDAC1P1-201ENST00000439229 848 ntBASIC13.18□□□□□ -0.3
PER3P56645 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
PER3P56645 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.18□□□□□ -0.3
PER3P56645 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.18□□□□□ -0.3
PER3P56645 AC093752.3-201ENST00000567343 901 ntBASIC13.18□□□□□ -0.3
PER3P56645 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 AC005357.2-202ENST00000590507 1060 ntBASIC13.18□□□□□ -0.3
PER3P56645 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.18□□□□□ -0.3
PER3P56645 AC005632.3-201ENST00000605544 308 ntBASIC13.18□□□□□ -0.3
PER3P56645 MIR6769A-201ENST00000617340 73 ntBASIC13.18□□□□□ -0.3
PER3P56645 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PER3P56645 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms