Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 AC239868.1-201ENST00000369385 493 ntBASIC13.12□□□□□ -0.31
LCN1P31025 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LCN1P31025 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 KRT8P13-201ENST00000463294 1010 ntBASIC13.12□□□□□ -0.31
LCN1P31025 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 AC092658.1-201ENST00000505836 891 ntBASIC13.12□□□□□ -0.31
LCN1P31025 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LCN1P31025 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 AL645939.5-201ENST00000606834 243 ntBASIC13.12□□□□□ -0.31
LCN1P31025 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.12□□□□□ -0.31
LCN1P31025 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.12□□□□□ -0.31
LCN1P31025 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.12□□□□□ -0.31
LCN1P31025 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 RCC2P1-201ENST00000452257 1476 ntBASIC13.11□□□□□ -0.31
LCN1P31025 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LCN1P31025 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LCN1P31025 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LCN1P31025 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.11□□□□□ -0.31
LCN1P31025 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LCN1P31025 AC130686.1-201ENST00000622936 2466 ntBASIC13.11□□□□□ -0.31
LCN1P31025 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LCN1P31025 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LCN1P31025 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.11□□□□□ -0.31
LCN1P31025 AC244107.1-201ENST00000442033 332 ntBASIC13.11□□□□□ -0.31
LCN1P31025 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.11□□□□□ -0.31
LCN1P31025 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.11□□□□□ -0.31
LCN1P31025 SCARNA20.5-201ENST00000516991 142 ntBASIC13.11□□□□□ -0.31
LCN1P31025 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.11□□□□□ -0.31
LCN1P31025 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.11□□□□□ -0.31
LCN1P31025 AL451050.2-201ENST00000606967 682 ntBASIC13.11□□□□□ -0.31
LCN1P31025 AL022334.2-201ENST00000610000 484 ntBASIC13.11□□□□□ -0.31
LCN1P31025 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.11□□□□□ -0.31
LCN1P31025 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
LCN1P31025 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCN1P31025 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms