Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RXRBP28702 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RXRBP28702 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RXRBP28702 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC17.81■□□□□ 0.44
RXRBP28702 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 CMC2-202ENST00000486645 766 ntTSL 3 BASIC17.81■□□□□ 0.44
RXRBP28702 RN7SL229P-201ENST00000495651 299 ntBASIC17.81■□□□□ 0.44
RXRBP28702 AC020893.2-201ENST00000506083 723 ntBASIC17.81■□□□□ 0.44
RXRBP28702 MIR2277-201ENST00000515916 93 ntBASIC17.81■□□□□ 0.44
RXRBP28702 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC17.81■□□□□ 0.44
RXRBP28702 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC17.81■□□□□ 0.44
RXRBP28702 AC005336.1-201ENST00000585431 1243 ntBASIC17.81■□□□□ 0.44
RXRBP28702 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC17.81■□□□□ 0.44
RXRBP28702 AZU1P1-201ENST00000603479 385 ntBASIC17.81■□□□□ 0.44
RXRBP28702 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17.81■□□□□ 0.44
RXRBP28702 AC147067.2-201ENST00000608161 289 ntBASIC17.81■□□□□ 0.44
RXRBP28702 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC17.81■□□□□ 0.44
RXRBP28702 AC010776.3-201ENST00000617349 424 ntBASIC17.81■□□□□ 0.44
RXRBP28702 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RXRBP28702 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RXRBP28702 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.81■□□□□ 0.44
RXRBP28702 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RXRBP28702 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC17.8■□□□□ 0.44
RXRBP28702 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 AC099689.1-201ENST00000624383 1302 ntBASIC17.8■□□□□ 0.44
RXRBP28702 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 MESTP4-201ENST00000412333 1204 ntBASIC17.8■□□□□ 0.44
RXRBP28702 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 AC023157.1-201ENST00000453713 402 ntBASIC17.8■□□□□ 0.44
RXRBP28702 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC17.8■□□□□ 0.44
RXRBP28702 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 RN7SL624P-201ENST00000580297 278 ntBASIC17.8■□□□□ 0.44
RXRBP28702 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC17.8■□□□□ 0.44
RXRBP28702 MIR6074-201ENST00000612054 107 ntBASIC17.8■□□□□ 0.44
RXRBP28702 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC17.8■□□□□ 0.44
RXRBP28702 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC17.8■□□□□ 0.44
RXRBP28702 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RXRBP28702 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.8■□□□□ 0.44
RXRBP28702 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.8■□□□□ 0.44
RXRBP28702 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RXRBP28702 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MKRN7P-201ENST00000433469 1371 ntBASIC17.79■□□□□ 0.44
RXRBP28702 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.79■□□□□ 0.44
RXRBP28702 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.79■□□□□ 0.44
RXRBP28702 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RXRBP28702 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms