Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHMP24386 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 MEX3B-202ENST00000558133 4333 ntBASIC13.26□□□□□ -0.29
CHMP24386 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 DPM3-202ENST00000368399 517 ntBASIC13.26□□□□□ -0.29
CHMP24386 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 AC004899.1-201ENST00000424687 1714 ntBASIC13.26□□□□□ -0.29
CHMP24386 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 AL161932.2-201ENST00000435436 679 ntBASIC13.26□□□□□ -0.29
CHMP24386 AL157407.1-201ENST00000435784 904 ntBASIC13.26□□□□□ -0.29
CHMP24386 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.26□□□□□ -0.29
CHMP24386 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHMP24386 ZNF767P-206ENST00000513792 565 ntBASIC13.26□□□□□ -0.29
CHMP24386 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHMP24386 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 AC104506.1-201ENST00000609247 429 ntBASIC13.26□□□□□ -0.29
CHMP24386 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CHMP24386 Z98259.2-201ENST00000641583 609 ntBASIC13.26□□□□□ -0.29
CHMP24386 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHMP24386 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CHMP24386 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CHMP24386 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CHMP24386 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 BX284668.4-201ENST00000453917 508 ntBASIC13.25□□□□□ -0.29
CHMP24386 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 AC027237.1-201ENST00000560942 655 ntBASIC13.25□□□□□ -0.29
CHMP24386 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.25□□□□□ -0.29
CHMP24386 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.25□□□□□ -0.29
CHMP24386 AC138649.2-201ENST00000615886 705 ntBASIC13.25□□□□□ -0.29
CHMP24386 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.25□□□□□ -0.29
CHMP24386 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.25□□□□□ -0.29
CHMP24386 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 AP002761.4-201ENST00000565433 3361 ntBASIC13.25□□□□□ -0.29
CHMP24386 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CHMP24386 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHMP24386 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHMP24386 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms