Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 RN7SL530P-201ENST00000485097 298 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AP001258.2-201ENST00000529891 490 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AL805961.1-203ENST00000641078 1258 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AC015909.3-201ENST00000572855 1794 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 AC131212.3-201ENST00000624087 4219 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 RPL13AP3-202ENST00000494676 1473 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AL031595.1-201ENST00000623969 4709 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 GOLGA2P8-201ENST00000505201 779 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 NAP1L6-202ENST00000641404 1222 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AC067931.2-201ENST00000623655 2003 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AC005562.1-201ENST00000583030 3219 ntBASIC12.65□□□□□ -0.38
HLA-DOBP13765 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DOBP13765 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DOBP13765 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
HLA-DOBP13765 AL139158.3-201ENST00000641212 1562 ntBASIC12.64□□□□□ -0.39
HLA-DOBP13765 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DOBP13765 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DOBP13765 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms