Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 AC114271.1-201ENST00000612689 2813 ntBASIC14.6□□□□□ -0.07
CD48P09326 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CD48P09326 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.6□□□□□ -0.07
CD48P09326 DUX4L50-201ENST00000455245 715 ntBASIC14.6□□□□□ -0.07
CD48P09326 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.6□□□□□ -0.07
CD48P09326 ALG1L13P-202ENST00000519320 584 ntBASIC14.6□□□□□ -0.07
CD48P09326 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.6□□□□□ -0.07
CD48P09326 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 AC138649.2-201ENST00000615886 705 ntBASIC14.6□□□□□ -0.07
CD48P09326 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 MIR6752-201ENST00000618442 71 ntBASIC14.6□□□□□ -0.07
CD48P09326 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CD48P09326 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 AC108024.1-201ENST00000626286 1721 ntBASIC14.6□□□□□ -0.07
CD48P09326 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CD48P09326 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CD48P09326 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.59□□□□□ -0.07
CD48P09326 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.59□□□□□ -0.07
CD48P09326 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.59□□□□□ -0.07
CD48P09326 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.59□□□□□ -0.07
CD48P09326 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.59□□□□□ -0.07
CD48P09326 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.59□□□□□ -0.07
CD48P09326 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.59□□□□□ -0.07
CD48P09326 AC243960.2-201ENST00000600996 747 ntBASIC14.59□□□□□ -0.07
CD48P09326 MIR6869-201ENST00000619434 62 ntBASIC14.59□□□□□ -0.07
CD48P09326 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CD48P09326 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CD48P09326 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD48P09326 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.58□□□□□ -0.07
CD48P09326 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.58□□□□□ -0.07
CD48P09326 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CD48P09326 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.58□□□□□ -0.07
CD48P09326 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.58□□□□□ -0.07
CD48P09326 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD48P09326 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CD48P09326 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CD48P09326 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 SNORA50C-201ENST00000408535 133 ntBASIC14.58□□□□□ -0.08
CD48P09326 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.58□□□□□ -0.08
CD48P09326 ACTG1P2-201ENST00000415776 1125 ntBASIC14.58□□□□□ -0.08
CD48P09326 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.58□□□□□ -0.08
CD48P09326 ACTG1P11-201ENST00000425411 1125 ntBASIC14.58□□□□□ -0.08
CD48P09326 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD48P09326 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms