Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DOAP06340 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DOAP06340 SBF1P1-201ENST00000444527 5631 ntBASIC16.51■□□□□ 0.23
HLA-DOAP06340 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DOAP06340 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DOAP06340 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.5■□□□□ 0.23
HLA-DOAP06340 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC005722.1-201ENST00000431878 964 ntBASIC16.5■□□□□ 0.23
HLA-DOAP06340 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC024293.1-201ENST00000467930 498 ntBASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC006158.1-201ENST00000610661 249 ntBASIC16.5■□□□□ 0.23
HLA-DOAP06340 AC073592.2-201ENST00000623062 780 ntBASIC16.5■□□□□ 0.23
HLA-DOAP06340 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DOAP06340 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DOAP06340 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AL365181.1-201ENST00000564032 1828 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 CICP16-201ENST00000502609 2813 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AP000354.1-201ENST00000396982 456 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ACTBP14-201ENST00000411655 1089 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PSMD4P1-201ENST00000433951 1109 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PGAM1P12-201ENST00000505622 748 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 MIR6746-201ENST00000620971 63 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC138466.4-201ENST00000623965 852 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 AC005912.2-201ENST00000619492 2400 ntBASIC16.49■□□□□ 0.23
HLA-DOAP06340 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DOAP06340 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms