Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TRBV12-3P01733 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 KRT18P9-201ENST00000604826 1300 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AL662890.1-201ENST00000396818 632 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AL353637.1-201ENST00000451571 732 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 TMEM198B-204ENST00000484016 896 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 TPI1-206ENST00000488464 791 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 IMP3P2-201ENST00000489760 475 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 RN7SL455P-201ENST00000580629 282 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 DUT-208ENST00000559540 1441 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 TBC1D3J-201ENST00000620719 1426 ntBASIC10.91□□□□□ -0.66
TRBV12-3P01733 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.91□□□□□ -0.66
TRBV12-3P01733 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TRBV12-3P01733 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 MIR645-201ENST00000385283 94 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 AL583805.1-201ENST00000391389 531 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 AC006987.1-201ENST00000413610 527 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AC007274.2-201ENST00000421675 662 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 RN7SL258P-201ENST00000478664 300 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 RN7SL67P-201ENST00000492147 296 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms