Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMAD6O43541 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.17□□□□□ -0.14
SMAD6O43541 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMAD6O43541 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 RNVU1-8-201ENST00000364272 125 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.16□□□□□ -0.14
SMAD6O43541 AK2P2-201ENST00000439142 405 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.16□□□□□ -0.14
SMAD6O43541 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.16□□□□□ -0.14
SMAD6O43541 SNORD3B-1-201ENST00000577988 758 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 RN7SL357P-201ENST00000581065 298 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 MIR4649-201ENST00000582839 64 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.16□□□□□ -0.14
SMAD6O43541 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 AL049840.2-201ENST00000602722 535 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 U62317.3-201ENST00000608319 855 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 AL161773.1-201ENST00000624845 863 ntBASIC14.16□□□□□ -0.14
SMAD6O43541 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMAD6O43541 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.16□□□□□ -0.14
SMAD6O43541 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.16□□□□□ -0.14
SMAD6O43541 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMAD6O43541 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.16□□□□□ -0.14
SMAD6O43541 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMAD6O43541 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.15□□□□□ -0.14
SMAD6O43541 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.15□□□□□ -0.14
SMAD6O43541 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.15□□□□□ -0.14
SMAD6O43541 EEF1DP2-201ENST00000433698 843 ntBASIC14.15□□□□□ -0.14
SMAD6O43541 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.15□□□□□ -0.14
SMAD6O43541 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMAD6O43541 RN7SL8P-201ENST00000461771 266 ntBASIC14.15□□□□□ -0.14
SMAD6O43541 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SMAD6O43541 RN7SL767P-201ENST00000493013 295 ntBASIC14.15□□□□□ -0.14
SMAD6O43541 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.15□□□□□ -0.14
SMAD6O43541 RNA5SP406-201ENST00000516106 112 ntBASIC14.15□□□□□ -0.14
SMAD6O43541 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.15□□□□□ -0.14
SMAD6O43541 AL132994.1-201ENST00000554098 400 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms