Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 RN7SL219P-201ENST00000582872 296 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AL008721.1-201ENST00000609964 604 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 LINC01783-202ENST00000614408 828 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 BX284668.2-205ENST00000619677 828 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AL445250.1-201ENST00000641671 2259 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AC138969.2-201ENST00000532739 9932 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AC010970.1-201ENST00000445125 1848 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AC005722.1-201ENST00000431878 964 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 AL161670.2-201ENST00000557650 1227 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 RN7SL665P-201ENST00000578793 300 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 KRT8P18-201ENST00000413425 1445 ntBASIC12.42□□□□□ -0.42
NPIPB4C9JG80 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.42□□□□□ -0.42
NPIPB4C9JG80 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 AC004623.1-201ENST00000624592 2127 ntBASIC12.41□□□□□ -0.42
NPIPB4C9JG80 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 KRT18P9-201ENST00000604826 1300 ntBASIC12.41□□□□□ -0.42
NPIPB4C9JG80 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NPIPB4C9JG80 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms