Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 CASP2-203ENST00000392925 616 ntTSL 3 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 CXXC1P1-202ENST00000489409 1212 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AC147876.1-201ENST00000504408 322 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 IGHVII-74-1-201ENST00000517572 241 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 ZNF493-208ENST00000599461 1769 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AC108024.1-201ENST00000626286 1721 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 AGAP10P-201ENST00000454844 2418 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 BEND3P1-201ENST00000421591 1944 ntBASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHANK2Q9UPX8 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 AC090820.1-201ENST00000519722 591 ntBASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 AC023051.2-201ENST00000541141 460 ntBASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 AC245369.7-201ENST00000631386 350 ntBASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 HCG11-201ENST00000411553 5696 ntBASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 AL358781.1-202ENST00000321081 1360 ntBASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHANK2Q9UPX8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC000077.1-201ENST00000420012 953 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 RN7SL524P-201ENST00000581152 300 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC006986.1-201ENST00000612764 241 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 ABCD1P2-201ENST00000429313 1601 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AP001120.3-201ENST00000585729 489 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 MDC1-209ENST00000613547 830 ntTSL 5 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AL450487.2-201ENST00000615934 407 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 AC008622.3-201ENST00000621170 600 ntBASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHANK2Q9UPX8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.23■□□□□ 0.83
SHANK2Q9UPX8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms