Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC067863.1-201ENST00000494933 530 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC104596.2-201ENST00000512793 793 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC131206.1-201ENST00000538078 1211 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC023310.3-201ENST00000557027 670 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 SORD2P-201ENST00000558556 1069 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC100756.1-201ENST00000562736 682 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC138749.3-201ENST00000567691 622 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC004466.1-201ENST00000599515 1080 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 AC116165.1-201ENST00000611806 668 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 KHSRPP1-201ENST00000427983 1768 ntBASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPH3ALQ9UNE2 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 AC022400.8-201ENST00000623453 3599 ntBASIC11.15□□□□□ -0.63
RPH3ALQ9UNE2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC026797.1-201ENST00000624837 2869 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AP000347.1-202ENST00000435868 847 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC114812.1-204ENST00000449669 728 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 GIMAP3P-201ENST00000495150 836 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC008738.7-201ENST00000609744 511 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AC004840.1-201ENST00000636359 365 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 PRSS30P-206ENST00000641773 873 ntBASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RPH3ALQ9UNE2 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms