Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.56□□□□□ -0.4
DUX4Q9UBX2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.56□□□□□ -0.4
DUX4Q9UBX2 AC106818.1-201ENST00000623223 3242 ntBASIC12.56□□□□□ -0.4
DUX4Q9UBX2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.56□□□□□ -0.4
DUX4Q9UBX2 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.56□□□□□ -0.4
DUX4Q9UBX2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 INE2-201ENST00000630399 1874 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ARSEP1-201ENST00000420443 635 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC245100.3-201ENST00000441281 285 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC119751.2-201ENST00000504529 210 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
DUX4Q9UBX2 AC020910.5-201ENST00000623668 1865 ntBASIC12.55□□□□□ -0.4
DUX4Q9UBX2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 AP001972.5-201ENST00000624624 2338 ntBASIC12.54□□□□□ -0.4
DUX4Q9UBX2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 OR8S1-201ENST00000310194 1080 ntBASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.54□□□□□ -0.4
DUX4Q9UBX2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms