Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 MAPK10-262ENST00000641051 5738 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL805961.2-201ENST00000642139 4817 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 FAM86LP-201ENST00000478302 853 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC097493.3-201ENST00000509725 367 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL049840.4-201ENST00000602422 811 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC104506.1-201ENST00000609247 429 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AL590560.3-201ENST00000623350 461 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC025183.3-201ENST00000623526 1482 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 AC145098.2-201ENST00000623593 3026 ntBASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SDF2L1Q9HCN8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SALL4P6-201ENST00000429385 1691 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AL354861.3-201ENST00000600140 2412 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 MIR943-201ENST00000401286 94 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 MIR1233-2-201ENST00000408138 82 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 MIR1233-1-201ENST00000408722 82 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AC092580.3-201ENST00000430932 139 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AL161932.2-201ENST00000435436 679 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 DRD5P1-201ENST00000456605 1438 ntBASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.05□□□□□ -0.64
SDF2L1Q9HCN8 AC135586.1-201ENST00000539323 574 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms