Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AC140113.1-201ENST00000603467 169 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 CICP8-201ENST00000455800 2813 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 LINC00115-201ENST00000473798 1317 ntBASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 AC004837.1-201ENST00000446267 564 ntBASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 GOLGA2P8-201ENST00000505201 779 ntBASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.02■□□□□ 0.31
RPAP1Q9BWH6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AL590824.1-201ENST00000403828 1349 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 NCLP1-201ENST00000445357 1963 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AC068760.1-201ENST00000493579 1953 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 PYY2-201ENST00000315776 282 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 BCAS2P2-201ENST00000425064 674 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 ALG1L6P-201ENST00000515248 758 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 OR5BD1P-201ENST00000532527 817 ntBASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.01■□□□□ 0.31
RPAP1Q9BWH6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RPAP1Q9BWH6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPAP1Q9BWH6 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms