Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 AC093813.1-201ENST00000605066 256 ntBASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 AL391069.4-201ENST00000609583 481 ntBASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC22CQ9BRL7 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.96□□□□□ -0.5
SEC22CQ9BRL7 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 MAPK10-262ENST00000641051 5738 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AL138709.1-201ENST00000614840 1693 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AL591424.1-201ENST00000442569 1213 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 FAM86LP-201ENST00000478302 853 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AC092865.5-201ENST00000545435 363 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AL359510.2-201ENST00000624958 2249 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 LRRC59-203ENST00000576448 1531 ntBASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC22CQ9BRL7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SEC22CQ9BRL7 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms