Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.75□□□□□ -0.21
PDLIM5Q96HC4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AC015909.3-201ENST00000572855 1794 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 BANF1P3-201ENST00000412556 261 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 LINC00265-2P-201ENST00000413372 782 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AL596276.2-201ENST00000447525 331 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ALG1L13P-202ENST00000519320 584 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 MIR6869-201ENST00000619434 62 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AC004623.1-201ENST00000624592 2127 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 AL445250.1-201ENST00000641671 2259 ntBASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDLIM5Q96HC4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CYP46A4P-201ENST00000414953 267 ntBASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 AC007279.1-201ENST00000448547 837 ntBASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 BX284668.4-201ENST00000453917 508 ntBASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 AL133467.4-201ENST00000602953 725 ntBASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.73□□□□□ -0.21
PDLIM5Q96HC4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms