Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AC138466.5-201ENST00000624002 808 ntBASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AC005562.1-201ENST00000583030 3219 ntBASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.8□□□□□ -0.04
SHKBP1Q8TBC3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 TPT1P11-201ENST00000458482 498 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 RNA5SP406-201ENST00000516106 112 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PTENP1-202ENST00000532280 3996 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC019294.4-201ENST00000561777 2905 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC145285.5-201ENST00000562217 361 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC002044.2-201ENST00000624910 970 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 MIR600HG-201ENST00000449175 5984 ntBASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHKBP1Q8TBC3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AL356585.2-201ENST00000625078 2396 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.78□□□□□ -0.04
SHKBP1Q8TBC3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms