Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKL3Q8IVW4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 OR8S1-201ENST00000310194 1080 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 SNORA50C-201ENST00000408535 133 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 SERPINA13P-202ENST00000478994 924 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AL583810.1-201ENST00000553344 1045 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 MIR497HG-202ENST00000572453 3838 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 SNORA50.1-201ENST00000628590 135 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AC079781.5-202ENST00000641784 3743 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 FMO6P-201ENST00000236166 1620 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AC008620.2-201ENST00000510294 1569 ntBASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKL3Q8IVW4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 BRD7P5-201ENST00000299197 1822 ntBASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKL3Q8IVW4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms