Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 PHBP15-201ENST00000574228 665 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 RN7SL574P-201ENST00000581512 297 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AF254983.2-201ENST00000612331 135 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 LINC01783-202ENST00000614408 828 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 BX284668.2-205ENST00000619677 828 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC091812.3-201ENST00000621362 345 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 AC067931.2-201ENST00000623655 2003 ntBASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LYSMD3Q7Z3D4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AC130686.1-201ENST00000622936 2466 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 RPL13AP3-202ENST00000494676 1473 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 BANF1P3-201ENST00000412556 261 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AC116345.2-201ENST00000512837 523 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 MIR4754-201ENST00000582477 89 ntBASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
LYSMD3Q7Z3D4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.21□□□□□ -0.14
LYSMD3Q7Z3D4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms