Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 U3.41-201ENST00000408711 219 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 RPSAP61-201ENST00000412542 878 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC093106.1-201ENST00000437271 352 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC090825.2-201ENST00000557959 739 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MIEF1-215ENST00000637854 213 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 NOS2P3-201ENST00000411468 867 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 NOS2P2-201ENST00000426269 867 ntBASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PDPN-208ENST00000509009 571 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 MED11-203ENST00000575284 652 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13DQ5THJ4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 LINC00638-201ENST00000555578 2518 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 USP8-219ENST00000625664 1568 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 RN7SL479P-201ENST00000472003 300 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 PRDX2P3-201ENST00000515779 586 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AACSP1-202ENST00000521412 1095 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC009132.1-201ENST00000565194 320 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC015912.3-201ENST00000619432 348 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 IMPDH1P5-201ENST00000439688 1540 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 KRT19P4-201ENST00000443208 943 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 CCNL2P1-201ENST00000512846 969 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC104117.4-201ENST00000521486 847 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC136475.7-201ENST00000602949 592 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 CR392039.2-201ENST00000623182 509 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 AC027601.5-201ENST00000624065 2482 ntBASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VPS13DQ5THJ4 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms