Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 VDAC1P11-201ENST00000458323 852 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 PPY-202ENST00000587006 431 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 AC239600.1-201ENST00000603201 462 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 MEP1AP1-201ENST00000636082 1097 ntBASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO4Q2I0M5 GUCY2EP-203ENST00000531117 1918 ntBASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RSPO4Q2I0M5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AL161727.1-201ENST00000457409 530 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 RNA5SP288-201ENST00000516075 93 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AL136298.3-201ENST00000556746 445 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AC132825.4-202ENST00000578792 434 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 TBC1D27-202ENST00000424239 1573 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AGAP7P-201ENST00000582299 2062 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 AGAP14-201ENST00000624701 2060 ntBASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RSPO4Q2I0M5 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RSPO4Q2I0M5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms