Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.03□□□□□ -0.8
RPL39P62891 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 GAS5-209ENST00000430245 723 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.03□□□□□ -0.8
RPL39P62891 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 AP001063.1-201ENST00000568332 529 ntBASIC10.03□□□□□ -0.8
RPL39P62891 WDR88-203ENST00000592765 651 ntTSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 AC093726.1-201ENST00000608064 963 ntBASIC10.03□□□□□ -0.8
RPL39P62891 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 AC002472.3-201ENST00000640124 621 ntBASIC10.03□□□□□ -0.8
RPL39P62891 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.03□□□□□ -0.8
RPL39P62891 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RPL39P62891 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.03□□□□□ -0.8
RPL39P62891 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RPL39P62891 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RPL39P62891 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.02□□□□□ -0.8
RPL39P62891 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
RPL39P62891 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 SLC7A15P-201ENST00000424028 1363 ntBASIC10.02□□□□□ -0.8
RPL39P62891 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
RPL39P62891 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC10.02□□□□□ -0.8
RPL39P62891 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
RPL39P62891 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 PCDHB17P-202ENST00000623466 3066 ntBASIC10.02□□□□□ -0.81
RPL39P62891 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.02□□□□□ -0.81
RPL39P62891 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.02□□□□□ -0.81
RPL39P62891 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.02□□□□□ -0.81
RPL39P62891 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.02□□□□□ -0.81
RPL39P62891 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.02□□□□□ -0.81
RPL39P62891 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.02□□□□□ -0.81
RPL39P62891 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 AC011495.1-201ENST00000498085 584 ntBASIC10.02□□□□□ -0.81
RPL39P62891 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 AC022137.2-201ENST00000503482 481 ntBASIC10.02□□□□□ -0.81
RPL39P62891 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.02□□□□□ -0.81
RPL39P62891 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
RPL39P62891 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RPL39P62891 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.02□□□□□ -0.81
RPL39P62891 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms