Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRPFP62306 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 CR383656.2-201ENST00000548656 2254 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SNRPFP62306 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
SNRPFP62306 AC006372.4-201ENST00000624122 1543 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 PES1P2-201ENST00000449745 1735 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRPFP62306 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 AL512306.1-201ENST00000432698 848 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.24■□□□□ 0.03
SNRPFP62306 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.24■□□□□ 0.03
SNRPFP62306 SCARNA12-201ENST00000459155 270 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 RN7SL720P-201ENST00000488178 304 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.24■□□□□ 0.03
SNRPFP62306 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRPFP62306 MIR4326-201ENST00000582203 59 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 AC097724.1-201ENST00000609581 426 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
SNRPFP62306 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRPFP62306 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNRPFP62306 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRPFP62306 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRPFP62306 ZNF493-208ENST00000599461 1769 ntBASIC15.24■□□□□ 0.03
SNRPFP62306 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SNRPFP62306 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SNRPFP62306 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.23■□□□□ 0.03
SNRPFP62306 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.23■□□□□ 0.03
SNRPFP62306 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SNRPFP62306 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 MIR1307-201ENST00000408840 149 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 SLC25A24P2-201ENST00000415059 510 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.23■□□□□ 0.03
SNRPFP62306 RPL8P2-201ENST00000430538 502 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 AC234782.1-201ENST00000451950 919 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 RN7SL767P-201ENST00000493013 295 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.23■□□□□ 0.03
SNRPFP62306 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 CHMP4BP1-201ENST00000556017 588 ntBASIC15.23■□□□□ 0.03
SNRPFP62306 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.23■□□□□ 0.03
SNRPFP62306 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNRPFP62306 AL049840.2-201ENST00000602722 535 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms