Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CXCR4P61073 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 AL033527.5-201ENST00000641382 801 ntBASIC12.89□□□□□ -0.35
CXCR4P61073 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 LAP3P2-201ENST00000454686 1454 ntBASIC12.89□□□□□ -0.35
CXCR4P61073 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CXCR4P61073 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.89□□□□□ -0.35
CXCR4P61073 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 AL138709.1-201ENST00000614840 1693 ntBASIC12.89□□□□□ -0.35
CXCR4P61073 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CXCR4P61073 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 AC124319.4-201ENST00000622931 2161 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SHMT1P1-201ENST00000419974 1312 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CXCR4P61073 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 AC103592.1-201ENST00000394513 664 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.88□□□□□ -0.35
CXCR4P61073 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.88□□□□□ -0.35
CXCR4P61073 PTP4A1P2-201ENST00000546033 454 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 WASH4P-201ENST00000564273 1246 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CXCR4P61073 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.88□□□□□ -0.35
CXCR4P61073 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.88□□□□□ -0.35
CXCR4P61073 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.88□□□□□ -0.35
CXCR4P61073 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 PCDHB17P-202ENST00000623466 3066 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CXCR4P61073 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 DDX12P-201ENST00000432996 2947 ntBASIC12.88□□□□□ -0.35
CXCR4P61073 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CXCR4P61073 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.88□□□□□ -0.35
CXCR4P61073 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.87□□□□□ -0.35
CXCR4P61073 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CXCR4P61073 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.87□□□□□ -0.35
CXCR4P61073 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms