Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.01□□□□□ -0.81
CKS1BP61024 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.01□□□□□ -0.81
CKS1BP61024 AC125807.1-201ENST00000483097 614 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.01□□□□□ -0.81
CKS1BP61024 AC069120.2-201ENST00000524091 540 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 AC027369.6-201ENST00000525520 931 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.01□□□□□ -0.81
CKS1BP61024 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.01□□□□□ -0.81
CKS1BP61024 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.01□□□□□ -0.81
CKS1BP61024 AC010336.2-201ENST00000564226 506 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
CKS1BP61024 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC10.01□□□□□ -0.81
CKS1BP61024 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CKS1BP61024 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CKS1BP61024 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CKS1BP61024 KIF28P-202ENST00000504864 3064 ntBASIC10.01□□□□□ -0.81
CKS1BP61024 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 AL031432.4-201ENST00000641729 2190 ntBASIC10□□□□□ -0.81
CKS1BP61024 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 AC087164.2-201ENST00000624514 3130 ntBASIC10□□□□□ -0.81
CKS1BP61024 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 PPP6R2P1-201ENST00000450880 1275 ntBASIC10□□□□□ -0.81
CKS1BP61024 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10□□□□□ -0.81
CKS1BP61024 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10□□□□□ -0.81
CKS1BP61024 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10□□□□□ -0.81
CKS1BP61024 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CKS1BP61024 AC010327.4-202ENST00000591484 748 ntBASIC10□□□□□ -0.81
CKS1BP61024 AL138828.2-201ENST00000615812 383 ntBASIC10□□□□□ -0.81
CKS1BP61024 SPDYE12P-201ENST00000618416 771 ntBASIC10□□□□□ -0.81
CKS1BP61024 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CKS1BP61024 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10□□□□□ -0.81
CKS1BP61024 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms