Protein–RNA interactions for Protein: P55735

SEC13, Protein SEC13 homolog, humanhuman

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P55735 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 SHMT1P1-201ENST00000419974 1312 ntBASIC14.2□□□□□ -0.14
SEC13P55735 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SEC13P55735 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.2□□□□□ -0.14
SEC13P55735 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SEC13P55735 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.2□□□□□ -0.14
SEC13P55735 OR2W2P-201ENST00000406313 909 ntBASIC14.2□□□□□ -0.14
SEC13P55735 KRT18P62-201ENST00000446618 1287 ntBASIC14.2□□□□□ -0.14
SEC13P55735 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.2□□□□□ -0.14
SEC13P55735 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.2□□□□□ -0.14
SEC13P55735 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.2□□□□□ -0.14
SEC13P55735 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.2□□□□□ -0.14
SEC13P55735 AL160191.2-201ENST00000603975 601 ntBASIC14.2□□□□□ -0.14
SEC13P55735 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 AL109809.1-201ENST00000418979 1367 ntBASIC14.2□□□□□ -0.14
SEC13P55735 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SEC13P55735 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC13P55735 AC015909.5-201ENST00000624336 2266 ntBASIC14.2□□□□□ -0.14
SEC13P55735 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.2□□□□□ -0.14
SEC13P55735 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC13P55735 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC13P55735 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC13P55735 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 AC117503.4-201ENST00000623229 1418 ntBASIC14.19□□□□□ -0.14
SEC13P55735 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 AL512599.1-201ENST00000430724 685 ntBASIC14.19□□□□□ -0.14
SEC13P55735 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 DDX39AP1-201ENST00000445147 1181 ntBASIC14.19□□□□□ -0.14
SEC13P55735 BPIFB5P-201ENST00000457066 1099 ntBASIC14.19□□□□□ -0.14
SEC13P55735 KRT18P15-201ENST00000458108 1291 ntBASIC14.19□□□□□ -0.14
SEC13P55735 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC13P55735 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.19□□□□□ -0.14
SEC13P55735 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC13P55735 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.19□□□□□ -0.14
SEC13P55735 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.19□□□□□ -0.14
SEC13P55735 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC13P55735 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SEC13P55735 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC13P55735 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC13P55735 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC13P55735 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC13P55735 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC13P55735 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC13P55735 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC13P55735 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC13P55735 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms