Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.78□□□□□ -0.36
CASP6P55212 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CASP6P55212 AC092123.2-201ENST00000611189 5421 ntBASIC12.78□□□□□ -0.36
CASP6P55212 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 PYY2-201ENST00000315776 282 ntBASIC12.78□□□□□ -0.36
CASP6P55212 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.78□□□□□ -0.36
CASP6P55212 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.78□□□□□ -0.36
CASP6P55212 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.78□□□□□ -0.36
CASP6P55212 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 AC145285.5-201ENST00000562217 361 ntBASIC12.78□□□□□ -0.36
CASP6P55212 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 MIR5196-201ENST00000578146 115 ntBASIC12.78□□□□□ -0.36
CASP6P55212 AC007250.1-201ENST00000608934 338 ntBASIC12.78□□□□□ -0.36
CASP6P55212 AC127024.7-201ENST00000625101 200 ntBASIC12.78□□□□□ -0.36
CASP6P55212 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.78□□□□□ -0.36
CASP6P55212 AC006504.5-208ENST00000588784 2401 ntBASIC12.78□□□□□ -0.36
CASP6P55212 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CASP6P55212 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CASP6P55212 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CASP6P55212 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.77□□□□□ -0.36
CASP6P55212 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CASP6P55212 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.77□□□□□ -0.36
CASP6P55212 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.77□□□□□ -0.36
CASP6P55212 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.77□□□□□ -0.36
CASP6P55212 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CASP6P55212 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.77□□□□□ -0.36
CASP6P55212 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CASP6P55212 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CASP6P55212 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 SCARNA12-201ENST00000459155 270 ntBASIC12.77□□□□□ -0.37
CASP6P55212 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.77□□□□□ -0.37
CASP6P55212 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CASP6P55212 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 MIR6756-201ENST00000616240 63 ntBASIC12.77□□□□□ -0.37
CASP6P55212 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CASP6P55212 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms