Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRPF1P55201 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.91■□□□□ 0.46
BRPF1P55201 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.91■□□□□ 0.46
BRPF1P55201 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.91■□□□□ 0.46
BRPF1P55201 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.9■□□□□ 0.46
BRPF1P55201 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.9■□□□□ 0.46
BRPF1P55201 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
BRPF1P55201 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
BRPF1P55201 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.9■□□□□ 0.46
BRPF1P55201 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
BRPF1P55201 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
BRPF1P55201 RPL7P35-201ENST00000446943 740 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 FTH1P22-201ENST00000456305 520 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 RN7SL67P-201ENST00000492147 296 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.9■□□□□ 0.46
BRPF1P55201 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.9■□□□□ 0.46
BRPF1P55201 DNM1P30-201ENST00000563586 452 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.9■□□□□ 0.46
BRPF1P55201 RN7SL121P-201ENST00000584223 273 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BRPF1P55201 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 TBC1D27-202ENST00000424239 1573 ntBASIC17.9■□□□□ 0.46
BRPF1P55201 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.9■□□□□ 0.46
BRPF1P55201 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRPF1P55201 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
BRPF1P55201 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BRPF1P55201 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
BRPF1P55201 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
BRPF1P55201 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC17.89■□□□□ 0.45
BRPF1P55201 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.89■□□□□ 0.45
BRPF1P55201 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
BRPF1P55201 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 NDUFS6P1-201ENST00000485187 316 ntBASIC17.89■□□□□ 0.45
BRPF1P55201 RPL18AP8-201ENST00000486071 528 ntBASIC17.89■□□□□ 0.45
BRPF1P55201 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.89■□□□□ 0.45
BRPF1P55201 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.89■□□□□ 0.45
BRPF1P55201 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.89■□□□□ 0.45
BRPF1P55201 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.89■□□□□ 0.45
BRPF1P55201 AC009145.4-201ENST00000625119 1294 ntBASIC17.89■□□□□ 0.45
BRPF1P55201 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.89■□□□□ 0.45
BRPF1P55201 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
BRPF1P55201 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRPF1P55201 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BRPF1P55201 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
BRPF1P55201 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
BRPF1P55201 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.88■□□□□ 0.45
BRPF1P55201 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.88■□□□□ 0.45
BRPF1P55201 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.88■□□□□ 0.45
BRPF1P55201 AC007279.1-201ENST00000448547 837 ntBASIC17.88■□□□□ 0.45
BRPF1P55201 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
BRPF1P55201 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRPF1P55201 AC010234.1-201ENST00000494599 870 ntBASIC17.88■□□□□ 0.45
BRPF1P55201 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.88■□□□□ 0.45
BRPF1P55201 AC095040.1-201ENST00000513286 675 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms