Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC090164.2-201ENST00000611487 516 ntBASIC14.79□□□□□ -0.04
SLC1A1P43005 AL096828.3-201ENST00000615354 462 ntBASIC14.79□□□□□ -0.04
SLC1A1P43005 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC1A1P43005 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC1A1P43005 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC1A1P43005 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 AC093462.1-201ENST00000621167 1683 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 COL6A4P2-202ENST00000504443 2753 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC1A1P43005 TSPY25P-201ENST00000429463 745 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 KRT223P-202ENST00000449164 1292 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 AC119751.2-201ENST00000504529 210 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC1A1P43005 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC1A1P43005 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 RN7SL560P-201ENST00000577943 264 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 MIR3615-201ENST00000581999 87 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 AC009542.2-202ENST00000619004 1067 ntBASIC14.78□□□□□ -0.04
SLC1A1P43005 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLC1A1P43005 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC1A1P43005 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC1A1P43005 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC1A1P43005 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SLC1A1P43005 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC1A1P43005 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SLC1A1P43005 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 AC073862.5-201ENST00000624129 2027 ntBASIC14.77□□□□□ -0.04
SLC1A1P43005 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.77□□□□□ -0.04
SLC1A1P43005 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SLC1A1P43005 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC1A1P43005 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SLC1A1P43005 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A1P43005 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AC009779.1-201ENST00000551138 283 ntBASIC14.77□□□□□ -0.05
SLC1A1P43005 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AC093752.3-201ENST00000567343 901 ntBASIC14.77□□□□□ -0.05
SLC1A1P43005 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.77□□□□□ -0.05
SLC1A1P43005 MIR3188-201ENST00000583494 85 ntBASIC14.77□□□□□ -0.05
SLC1A1P43005 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AL132994.2-201ENST00000603120 687 ntBASIC14.77□□□□□ -0.05
SLC1A1P43005 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.77□□□□□ -0.05
SLC1A1P43005 AC007663.3-201ENST00000609632 465 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms