Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD40P25942 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD40P25942 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 PEG13-201ENST00000631594 5667 ntBASIC12.15□□□□□ -0.46
CD40P25942 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.15□□□□□ -0.46
CD40P25942 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 AC018463.1-201ENST00000456674 917 ntBASIC12.15□□□□□ -0.46
CD40P25942 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 RN7SL564P-201ENST00000496309 250 ntBASIC12.15□□□□□ -0.46
CD40P25942 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
CD40P25942 AC132825.4-202ENST00000578792 434 ntBASIC12.15□□□□□ -0.46
CD40P25942 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.15□□□□□ -0.46
CD40P25942 AC140113.1-201ENST00000603467 169 ntBASIC12.15□□□□□ -0.46
CD40P25942 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.15□□□□□ -0.46
CD40P25942 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CD40P25942 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 CICP16-201ENST00000502609 2813 ntBASIC12.15□□□□□ -0.46
CD40P25942 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
CD40P25942 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD40P25942 LINC02486-201ENST00000604157 3000 ntBASIC12.15□□□□□ -0.46
CD40P25942 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD40P25942 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD40P25942 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
CD40P25942 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD40P25942 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms