Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.81□□□□□ -0.68
NTF3P20783 TLE1P1-201ENST00000422965 589 ntBASIC10.81□□□□□ -0.68
NTF3P20783 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.81□□□□□ -0.68
NTF3P20783 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.81□□□□□ -0.68
NTF3P20783 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 AP000344.2-201ENST00000512987 629 ntBASIC10.81□□□□□ -0.68
NTF3P20783 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.81□□□□□ -0.68
NTF3P20783 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
NTF3P20783 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.81□□□□□ -0.68
NTF3P20783 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
NTF3P20783 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.81□□□□□ -0.68
NTF3P20783 DDX12P-201ENST00000432996 2947 ntBASIC10.81□□□□□ -0.68
NTF3P20783 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 AL445250.1-201ENST00000641671 2259 ntBASIC10.81□□□□□ -0.68
NTF3P20783 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NTF3P20783 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NTF3P20783 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 AL391647.1-201ENST00000395664 511 ntBASIC10.8□□□□□ -0.68
NTF3P20783 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.8□□□□□ -0.68
NTF3P20783 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.8□□□□□ -0.68
NTF3P20783 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.8□□□□□ -0.68
NTF3P20783 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.8□□□□□ -0.68
NTF3P20783 AC107373.2-201ENST00000607735 490 ntBASIC10.8□□□□□ -0.68
NTF3P20783 AL596442.2-201ENST00000610240 980 ntBASIC10.8□□□□□ -0.68
NTF3P20783 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 AC009474.1-201ENST00000455096 1565 ntBASIC10.8□□□□□ -0.68
NTF3P20783 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NTF3P20783 TUBB8P4-201ENST00000511806 1324 ntBASIC10.8□□□□□ -0.68
NTF3P20783 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NTF3P20783 AC115284.2-201ENST00000624646 2054 ntBASIC10.8□□□□□ -0.68
NTF3P20783 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NTF3P20783 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NTF3P20783 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NTF3P20783 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC10.79□□□□□ -0.68
NTF3P20783 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms