Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 KRT18P15-201ENST00000458108 1291 ntBASIC17■□□□□ 0.31
APPP05067 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17■□□□□ 0.31
APPP05067 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17■□□□□ 0.31
APPP05067 AC007326.1-201ENST00000604539 458 ntBASIC17■□□□□ 0.31
APPP05067 AC006453.1-201ENST00000636037 1257 ntBASIC17■□□□□ 0.31
APPP05067 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
APPP05067 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17■□□□□ 0.31
APPP05067 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APPP05067 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.99■□□□□ 0.31
APPP05067 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 AL928921.2-201ENST00000641325 2442 ntBASIC16.99■□□□□ 0.31
APPP05067 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.99■□□□□ 0.31
APPP05067 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
APPP05067 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.99■□□□□ 0.31
APPP05067 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 AC234782.1-201ENST00000451950 919 ntBASIC16.99■□□□□ 0.31
APPP05067 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.99■□□□□ 0.31
APPP05067 AC114947.1-202ENST00000514136 344 ntBASIC16.99■□□□□ 0.31
APPP05067 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APPP05067 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
APPP05067 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.99■□□□□ 0.31
APPP05067 MIR3907-201ENST00000579424 151 ntBASIC16.99■□□□□ 0.31
APPP05067 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.99■□□□□ 0.31
APPP05067 AC015967.2-201ENST00000624092 234 ntBASIC16.99■□□□□ 0.31
APPP05067 AC006435.4-201ENST00000625037 234 ntBASIC16.99■□□□□ 0.31
APPP05067 AL356737.1-201ENST00000634391 234 ntBASIC16.99■□□□□ 0.31
APPP05067 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
APPP05067 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.99■□□□□ 0.31
APPP05067 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APPP05067 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.99■□□□□ 0.31
APPP05067 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 AC067931.2-201ENST00000623655 2003 ntBASIC16.99■□□□□ 0.31
APPP05067 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
APPP05067 MEX3B-202ENST00000558133 4333 ntBASIC16.99■□□□□ 0.31
APPP05067 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APPP05067 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.98■□□□□ 0.31
APPP05067 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
APPP05067 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.98■□□□□ 0.31
APPP05067 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 AC006987.1-201ENST00000413610 527 ntBASIC16.98■□□□□ 0.31
APPP05067 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.98■□□□□ 0.31
APPP05067 CEP164P1-201ENST00000455142 418 ntBASIC16.98■□□□□ 0.31
APPP05067 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.98■□□□□ 0.31
APPP05067 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.98■□□□□ 0.31
APPP05067 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.98■□□□□ 0.31
APPP05067 MIR3677-201ENST00000578964 60 ntBASIC16.98■□□□□ 0.31
APPP05067 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
APPP05067 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.98■□□□□ 0.31
APPP05067 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 MARK2P16-201ENST00000605714 1723 ntBASIC16.98■□□□□ 0.31
APPP05067 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
APPP05067 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
APPP05067 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
APPP05067 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms