Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 MTHFD2P7-201ENST00000483867 983 ntBASIC14.91□□□□□ -0.02
TIMP1P01033 FAM86JP-202ENST00000484500 988 ntBASIC14.91□□□□□ -0.02
TIMP1P01033 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.91□□□□□ -0.02
TIMP1P01033 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.91□□□□□ -0.02
TIMP1P01033 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.91□□□□□ -0.02
TIMP1P01033 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.91□□□□□ -0.02
TIMP1P01033 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TIMP1P01033 AC008622.3-201ENST00000621170 600 ntBASIC14.91□□□□□ -0.02
TIMP1P01033 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
TIMP1P01033 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.91□□□□□ -0.02
TIMP1P01033 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TIMP1P01033 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
TIMP1P01033 RCC2P1-201ENST00000452257 1476 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.9□□□□□ -0.02
TIMP1P01033 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 ACTG1P23-201ENST00000437653 1074 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 SLC25A15P1-201ENST00000456738 342 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 OR52V1P-201ENST00000515557 898 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
TIMP1P01033 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
TIMP1P01033 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 METTL7AP1-201ENST00000547343 496 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ABCD1P3-201ENST00000562927 605 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.9□□□□□ -0.02
TIMP1P01033 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.9□□□□□ -0.02
TIMP1P01033 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.9□□□□□ -0.02
TIMP1P01033 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TIMP1P01033 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 AC011477.7-201ENST00000617163 1440 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMP1P01033 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMP1P01033 AC245140.2-201ENST00000624054 1939 ntBASIC14.9□□□□□ -0.02
TIMP1P01033 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMP1P01033 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 FLJ16779-201ENST00000612722 7638 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms