Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 AL022313.4-201ENST00000562756 2046 ntBASIC6.04□□□□□ -1.44
USH2AO75445 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 RNA5SP84-201ENST00000364740 107 ntBASIC6.04□□□□□ -1.44
USH2AO75445 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 AC087163.1-201ENST00000430089 381 ntBASIC6.04□□□□□ -1.44
USH2AO75445 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 TCP10-205ENST00000476779 646 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC6.04□□□□□ -1.44
USH2AO75445 Z82244.1-201ENST00000631502 840 ntBASIC6.04□□□□□ -1.44
USH2AO75445 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
USH2AO75445 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USH2AO75445 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USH2AO75445 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 AC089987.1-201ENST00000551654 2209 ntBASIC6.04□□□□□ -1.44
USH2AO75445 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 PHKA1P1-201ENST00000420457 621 ntBASIC6.04□□□□□ -1.44
USH2AO75445 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 AC005086.1-201ENST00000566572 801 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 MIR4689-201ENST00000582517 70 ntBASIC6.04□□□□□ -1.44
USH2AO75445 WSB1-213ENST00000583193 552 ntTSL 4 BASIC6.04□□□□□ -1.44
USH2AO75445 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC6.04□□□□□ -1.44
USH2AO75445 AC130469.2-201ENST00000625112 1092 ntBASIC6.04□□□□□ -1.44
USH2AO75445 RPS9-213ENST00000626547 476 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 OS9-207ENST00000439210 1946 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 AC005562.1-201ENST00000583030 3219 ntBASIC6.04□□□□□ -1.44
USH2AO75445 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC6.04□□□□□ -1.44
USH2AO75445 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC6.04□□□□□ -1.44
USH2AO75445 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USH2AO75445 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USH2AO75445 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC6.03□□□□□ -1.44
USH2AO75445 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 AL021407.3-201ENST00000407522 486 ntBASIC6.03□□□□□ -1.44
USH2AO75445 AL133517.1-201ENST00000413412 748 ntBASIC6.03□□□□□ -1.44
USH2AO75445 AC098591.1-202ENST00000507914 937 ntBASIC6.03□□□□□ -1.44
USH2AO75445 NT5CP2-201ENST00000553305 561 ntBASIC6.03□□□□□ -1.44
USH2AO75445 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 DKFZP434H168-201ENST00000567381 1905 ntBASIC6.03□□□□□ -1.44
USH2AO75445 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC6.03□□□□□ -1.44
USH2AO75445 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USH2AO75445 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USH2AO75445 AC073347.1-201ENST00000421633 2643 ntBASIC6.03□□□□□ -1.44
USH2AO75445 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC6.03□□□□□ -1.44
USH2AO75445 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms