Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZIC3O60481 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZIC3O60481 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZIC3O60481 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZIC3O60481 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.65□□□□□ -0.38
ZIC3O60481 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZIC3O60481 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 AC093462.1-201ENST00000621167 1683 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 AC019109.1-201ENST00000401725 1874 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ZIC3O60481 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 AC092573.1-201ENST00000433054 884 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.64□□□□□ -0.39
ZIC3O60481 AC098935.1-201ENST00000446057 611 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 AP000911.2-201ENST00000534330 502 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 MIR4706-201ENST00000582134 82 ntBASIC12.64□□□□□ -0.39
ZIC3O60481 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.64□□□□□ -0.39
ZIC3O60481 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZIC3O60481 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZIC3O60481 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.64□□□□□ -0.39
ZIC3O60481 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
ZIC3O60481 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 AC023794.5-201ENST00000564380 2157 ntBASIC12.63□□□□□ -0.39
ZIC3O60481 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 ODCP-201ENST00000459650 1639 ntBASIC12.63□□□□□ -0.39
ZIC3O60481 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC12.63□□□□□ -0.39
ZIC3O60481 AL359881.3-201ENST00000602640 1721 ntBASIC12.63□□□□□ -0.39
ZIC3O60481 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ZIC3O60481 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ZIC3O60481 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.63□□□□□ -0.39
ZIC3O60481 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.63□□□□□ -0.39
ZIC3O60481 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.63□□□□□ -0.39
ZIC3O60481 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ZIC3O60481 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.63□□□□□ -0.39
ZIC3O60481 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.63□□□□□ -0.39
ZIC3O60481 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms