Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.25□□□□□ -0.13
KDELR3O43731 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KDELR3O43731 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KDELR3O43731 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.24□□□□□ -0.13
KDELR3O43731 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KDELR3O43731 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 AC092506.1-202ENST00000401022 528 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.24□□□□□ -0.13
KDELR3O43731 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 NOC2LP1-201ENST00000450578 752 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.24□□□□□ -0.13
KDELR3O43731 OR5BD1P-201ENST00000532527 817 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 AP005264.5-201ENST00000590066 467 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.24□□□□□ -0.13
KDELR3O43731 AC087392.5-201ENST00000612517 489 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.24□□□□□ -0.13
KDELR3O43731 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KDELR3O43731 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.24□□□□□ -0.13
KDELR3O43731 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 SBF1P1-201ENST00000444527 5631 ntBASIC14.24□□□□□ -0.13
KDELR3O43731 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.24□□□□□ -0.13
KDELR3O43731 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
KDELR3O43731 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KDELR3O43731 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.23□□□□□ -0.13
KDELR3O43731 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 AC019109.1-201ENST00000401725 1874 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KDELR3O43731 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
KDELR3O43731 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 AC092573.1-201ENST00000433054 884 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.23□□□□□ -0.13
KDELR3O43731 RN7SL767P-201ENST00000493013 295 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.23□□□□□ -0.13
KDELR3O43731 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.23□□□□□ -0.13
KDELR3O43731 AL031713.1-201ENST00000564813 661 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.23□□□□□ -0.13
KDELR3O43731 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.23□□□□□ -0.13
KDELR3O43731 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.23□□□□□ -0.13
KDELR3O43731 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.23□□□□□ -0.13
KDELR3O43731 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KDELR3O43731 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.23□□□□□ -0.13
KDELR3O43731 AC025183.3-201ENST00000623526 1482 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.23□□□□□ -0.13
KDELR3O43731 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KDELR3O43731 ODCP-201ENST00000459650 1639 ntBASIC14.23□□□□□ -0.13
KDELR3O43731 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.22□□□□□ -0.13
KDELR3O43731 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDELR3O43731 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDELR3O43731 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KDELR3O43731 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KDELR3O43731 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms